ProteomeXchange - Mission
Public Data. Public PXD datasets can be browsed over at ProteomeCentral. An RSS feed is also available. Data Submission. ProteomeXchange fully supports both MS/MS proteomics and …
PRIDE - Proteomics Identification Database - EMBL-EBI
PRIDE Submission Tool enables direct user submissions of protein and peptide identification or quantification data, along with the spectra to PRIDE Archive.
Mass spectrometry-based proteomics data from thousands of …
2024年1月23日 · Here we provide a curated, large scale, label free mass spectrometry-based proteomics data set derived from HeLa cell lines for general purpose machine learning and …
A practical guide to interpreting and generating bottom‐up proteomics …
2022年2月2日 · In this review, we provide an overview of commonly used visualizations, starting with raw data of traditional and novel MS technologies, then basic peptide and protein level …
Using R for proteomics data analysis • RforProteomics
protViz helps with quality checks, visualizations and analysis of mass spectrometry data, coming from proteomics experiments. The package is developed, tested and used at the Functional …
ProteomicsDB
ProteomicsDB is a multi-omics and multi-organism resource for life science research. It covers e.g. proteomics, transcriptomics, and phenomics data for e.g. human, mouse, arabidopsis and …
ProteomeCentral Datasets - ProteomeXchange
Need to access individual spectra from a ProteomeXchange dataset? The TGF-β mimic TGM4 achieves cell specificity through combinatorial surface co-receptor binding. Human proteome …
Tidyproteomics: an open-source R package and data object for ...
2023年6月6日 · We present tidyproteomics, an open-source R package for the post-analysis and visualization of proteomic data which aims to facilitate data explorations from multiple …
Bioinformatic analysis of proteomics data - BMC Systems Biology
2014年3月13日 · Here we discuss current strategies on how to gather, filter and analyze proteomic data sates using available software packages. Proteins are involved in almost all …
ProteomicsDB: a multi-omics and multi-organism resource for life ...
2019年10月30日 · ProteomicsDB (https://www.ProteomicsDB.org) started as a protein-centric in-memory database for the exploration of large collections of quantitative mass spectrometry …